Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIRIIDSHTGGEPTRLVIGGFPDLGQGDMAERRRLLGE--RHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRIG----PGVHRIETPVGEVEATLH-EDG---SVSVRNVPAYRYRRQVSVEVPGIGRVSGDIAWGGNWFFL--VAGHGQRLAGDNLDALTAYTVAVQQALDDQ-DIRGEDGGAIDHIE--LFAD-DPHADSRN-FVLCPGKAYDRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEWLDGQPGGP-IVPTIRGRAHVSAEATLLLADDDPFAWGIRR |
| 4Q2H Chain:A ((27-354)) | -RTIQLLDVHCEGEIGRVAIGGVPKIPGNTVAEQLHWLNTDPKGEELRRFLVLEPRGAPIGSVNLLLPARHPDADAAFIILQPDQAHASSGSNSICVTTALLESGIVEMKEPETVVTLETAAGLVRATATCRDGRCEKVRLTMVPSFVHELDVGIDTPQWGRIKLDLCYGGIFYALVDVGQIGLTIGKANAASLVQAGMVLKELINRTVPVVHPEIPAISGVAYVMFRDIDADGAIRTCTTMWPGRA-DRSPCGTGNSANLATLHARGKARVGDVFKSRSIIGSEFEVGLQAETEVAGKPAIIPTITGRGFTFGLSQVALDPFDPMANGFAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163062 for 2724 contacts (-59.9/contact) +
2D Compatibility (PS) -33583 + (NN) -15924 + (LL) 300
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -233969.0 ( -85.89 by residue)
QMean score : 0.544
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