Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMHPRRLLAVLGVVVLTSMTSCTSFSSSRSSSMDKTGWITHCFGRFLIDLPPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVG-----VTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTF-AGMETLRK--GKHPVGSLPGEEYLVAGSDKGQRGYTFMWEVQGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTSSSPRGGNAGPSPAPKPATPGGQTLGDHYVYEEFLSSLKPKDSWLDDL |
3G5R Chain:A ((297-377)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAGVLAGVEGYLESAATGFLAGLNAARKALGLPPVA--PPEESMLGGLVRYLATANPEGFQPMYANWGLVPPVEGRMGKKEKRQAMYRRGLEAFSAWLSGLNPPLP---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4841 for 388 contacts (12.5/contact) +
2D Compatibility (PS) -7449 + (NN) -314 + (LL) 15028
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 7306.0 ( 18.83 by residue)
QMean score : -0.014
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