Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAELGIFNGHLLQHLLAALWFLFCWVGYTRYATWKGRDTACLASVLHLYREDWMRRLLLRDNRIADASVIGNLERNASFFASSTLIILAGILTLLGSTDRAVSVLADLPFVEEASRGLSELKLLCLAVVFVYAFFTFSWCMRQYNFAAILVGSAPMIGERNVGELERKSFAERAARVISLAANQFNFGLRSYYFGLAMLAWFINSWFFMLVTAGVVLVLYRREFHSDVLEVMVYTETAIAESPREGEGEVPRG |
| 1OKD Chain:A ((8-40)) | ------------------------------------------------------------------------------------------------------------LPGIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKDAPLEH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5634 for 112 contacts (-50.3/contact) +
2D Compatibility (PS) -3508 + (NN) 930 + (LL) 9900
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -962.0 ( -8.59 by residue)
QMean score : -0.179
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