Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRVINNFMIQGGGFEPGMKQKPTRAPIKNEANNGLTNKVGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
1V9T Chain:A ((7-165))
-VLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDH---GQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVLP-
General information:
TITO was launched using:
RESULT:
Template:
1V9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57038 for 1281 contacts (-44.5/contact) +
2D Compatibility (PS) -16917 + (NN) -9094 + (LL) 368
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -101931.0 ( -79.57 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1V9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V9T-query.scw
PDB file :
Tito_Scwrl_1V9T.pdb
: