Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWTKPSFTDLRLGF--EVTLYFANR
1D0D Chain:A ((9-29))
----RDWIDECDSNEGGERAYFRNG
General information:
TITO was launched using:
RESULT:
Template:
1D0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133 for 47 contacts (-2.8/contact) +
2D Compatibility (PS) -2097 + (NN) -1538 + (LL) 480
1D Compatibility (HY) 800 + (ID) 200
Total energy: -2688.0 ( -57.19 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1D0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D0D-query.scw
PDB file :
Tito_Scwrl_1D0D.pdb
: