Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQ---LKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEK---SLPAEIHQVIERQYQGVLRHHDRVRALRDARA
1JI5 Chain:A ((1-141))
-------QVIEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLE----ISSIQEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLGIYTELEKHAWMLRAFLN---
General information:
TITO was launched using:
RESULT:
Template:
1JI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12464 for 1014 contacts (-12.3/contact) +
2D Compatibility (PS) -15077 + (NN) -11725 + (LL) 908
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -45958.0 ( -45.32 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_1JI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JI5-query.scw
PDB file :
Tito_Scwrl_1JI5.pdb
: