Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNPKRGAIRELLALLRPFRAIVAVSIALGMAGGLAITLLLASINNALHSENGLGQGVLLSFGGLCLLALVSSIVSDIGTSYVGQHIIAKLRKELGEKVLSAPIEQIERYRTHRLIPVLTHDIDTISDFSFSF------TPL------AIALTITFGCLGYLAYLSVPMFLLTVVAIVIGTAAQYLARSRGFKGFYAARDLEDELQKHYTAIASGAKELRIHRPRRYRMHTGRISETANNIRDLHISSINIFILAKTFGSMLFFVVIGL--ALTLQAYWPSSNP---AAITGFVMVLLYMKGPLEQVVTILPIVSRAQVAFQRVAELSERFSSPEPHLLLSEQEAPDKTVDSLELRDVRYSPPAVEGSEPFH-------------LGPINLRIAQGDIVFIVGENGCGKTTLIKLLLGLYRPQSGEILLNGEPVSAETRDDYRQLFSTIFADYYLF-----DDLVQGKQASLQNATQYLQRLEIAHK--VSVMDGNFSTT-----DLSTGQRKRLALINAWLEERPVLVFDEWAADQDPAFRRVFYTELLPDLKR--QGKTIIVISHDDRYFEMADQLIRLSAGKVVKETETA |
| 4Q4J Chain:A ((63-555)) | -----------------------------------------------------LKTGILMLI--VALIGAVGGIGSTVFASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLIFLIPPIVLLFV----------WLTK-KGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFR--KANESLRRSIISAFSLIVFALPL--FIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLE------------VLNEKPAIEEADNALAL-------PNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDSTCSVDPITEK----RILDGLKRYTKGSTTFIITQKIPTALLADKILVLHEGKV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211773 for 3090 contacts (-68.5/contact) +
2D Compatibility (PS) -47685 + (NN) -12704 + (LL) 7004
1D Compatibility (HY) -36800 + (ID) 6350
Total energy: -308308.0 ( -99.78 by residue)
QMean score : 0.277
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