Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREHTYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHS---SHGVYACTQGPRLETVAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVLAG
4GLJ Chain:A ((17-222))
----AIIGGSGLYQMQALTNKRSVKIETPYGEPSDDIVLGELNGVTVAFLTRHGQGHRLTPSEVPYRANIYALKTLGVRYIVSVSAVGSLQETLKPLDMVIPDQMIDMTKQRVSTFF-GD-GAVAHVSMADPLCPEVADILIRAYDNADIADGQCHAKATYVCIEGPQFSTRAESHWYRQMQADIIGMTNMPEAKLAREASIAYATLALVTD------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118730 for 1580 contacts (-75.1/contact) +
2D Compatibility (PS) -22312 + (NN) -13397 + (LL) 3700
1D Compatibility (HY) -18800 + (ID) 4300
Total energy: -173839.0 ( -110.02 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_4GLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GLJ-query.scw
PDB file :
Tito_Scwrl_4GLJ.pdb
: