Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDKKTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLEAFEQLLGKRRELLGELDPGLSGKERRALAAAFYLSRKHRDAQVDAGCPLPATLAEVARLPEGFREVLSRHVEIMVTSLAESPEETDVALADLVLMIGGLALARALGPGELSDRVLRAAKQAVN
3LHQ Chain:A ((14-67))
------ETRQHILDVALRLFSQQGVSATSLAEIANAAGVTRGAIYWHFKNKSDLFSEIWE------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26662 for 348 contacts (-76.6/contact) +
2D Compatibility (PS) -5743 + (NN) -2373 + (LL) 9476
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -29102.0 ( -83.63 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_3LHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LHQ-query.scw
PDB file :
Tito_Scwrl_3LHQ.pdb
: