Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEP--GTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR
2LJK Chain:A ((21-96))
-PGSGVRIVVEYCEPCGF--EATYL--ELASAVKEQYPGIEIESRLGGTGAFEIEINGQLVFSKLENGGFPYEKDLIEAIR-----------------
General information:
TITO was launched using:
RESULT:
Template:
2LJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31860 for 459 contacts (-69.4/contact) +
2D Compatibility (PS) -8491 + (NN) -8437 + (LL) 904
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -56334.0 ( -122.73 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_2LJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LJK-query.scw
PDB file :
Tito_Scwrl_2LJK.pdb
: