Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
3MOL Chain:A ((2-184))
-SISISYSTTYSGWTVADYLADWSAYFGDVNARPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAA---------------------
General information:
TITO was launched using:
RESULT:
Template:
3MOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108265 for 1544 contacts (-70.1/contact) +
2D Compatibility (PS) -20185 + (NN) -14044 + (LL) 2180
1D Compatibility (HY) -21200 + (ID) 9100
Total energy: -170614.0 ( -110.50 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3MOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MOL-query.scw
PDB file :
Tito_Scwrl_3MOL.pdb
: