Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
1NBU Chain:A ((4-102))
---------RIELRGLTVHGRHGVYDHERVAGQRFVIDVTVWIDLAEAANSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMDDQRVHAVEVAVHKPQA---------------
General information:
TITO was launched using:
RESULT:
Template:
1NBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72988 for 692 contacts (-105.5/contact) +
2D Compatibility (PS) -10435 + (NN) 302 + (LL) 1828
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -89043.0 ( -128.67 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1NBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NBU-query.scw
PDB file :
Tito_Scwrl_1NBU.pdb
: