Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEK-FAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA
2WUL Chain:A ((11-102))
----EQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDL-------------
General information:
TITO was launched using:
RESULT:
Template:
2WUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60224 for 657 contacts (-91.7/contact) +
2D Compatibility (PS) -10291 + (NN) -7417 + (LL) 1772
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -88010.0 ( -133.96 by residue)
QMean score : 0.738
(partial model without unconserved sides chains):
PDB file :
Tito_2WUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUL-query.scw
PDB file :
Tito_Scwrl_2WUL.pdb
: