Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSS--SRPLAAHAEQSREIEDWFARLGTQVVRDWSGLP---LKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDL--RQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
4E1Y Chain:A ((53-309)) | ---------------------------------------------------ATPNPQQGEMVIPRRYLSGNHGPVNPDYEPVVTL------YRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKADAL----LNYDPKS-QSWYQVEWSAATAAFALSTMMAEPNVDTAQRERVVK-WLNR----VARHQTSFPGGDTSCCNNASYWRGQEATIIGVISKDDELFRWGLGRYVQAMGLINEDGSFVHEMTRHEQSLHYQNYAMLPLTMIAETASRQGIDLYAYKENGRDIHSARKFVFAAVKNPDLIKKYASEPQDTRAFK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66481 for 1980 contacts (-33.6/contact) +
2D Compatibility (PS) -27207 + (NN) -14084 + (LL) 6484
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -118438.0 ( -59.82 by residue)
QMean score : 0.481
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