Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQHLER
1PC5 Chain:A ((2-107))
-AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECGAQAIFSEDEVPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHLER
General information:
TITO was launched using:
RESULT:
Template:
1PC5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76547 for 819 contacts (-93.5/contact) +
2D Compatibility (PS) -11401 + (NN) -8974 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 4900
Total energy: -118014.0 ( -144.10 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_1PC5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PC5-query.scw
PDB file :
Tito_Scwrl_1PC5.pdb
: