Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTAFFFDELCLWHAAGPHALTLPVGGWVQPPAAAGHAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSLGQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQ--DGCFPPGYSGAEDIGEDRGRGFNLNVP----LLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDA--NAVDPLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA-AFRDFQRQRLEELAAQFGLCPAQPLQAAR |
| 2VQV Chain:A ((127-386)) | ---------------------------------------------------------------------------------------------------------------ARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGL----AGGRIVLALEGGYDLTAICDASEACVSALLGNE---LDPLPEKVLQQRPNANAVRSM--EKVMEIHSKYWRC--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164243 for 2199 contacts (-74.7/contact) +
2D Compatibility (PS) -27961 + (NN) -19479 + (LL) 7336
1D Compatibility (HY) -18400 + (ID) 4700
Total energy: -227447.0 ( -103.43 by residue)
QMean score : 0.507
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