Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSNRYPLPAQTGLVVAPGLPPKNSTLRPDQLNKRLSSAWHHLYDLCPELLKIDPPDGLTILRGFLQWAAEQKAAWNWAMHLRLYCWLLQSPFGAKVTDEHLEVLMDASAARWTVDDTSANRGILLASQGGAHITQDWKAPQAGAGTRVPLERLDLPAPNWTFAYCAVPDPRLREFPGWKPLPARGSLVG |
| 4CKB Chain:A ((197-260)) | --------------------PRDNETVPYDELIKELTTLSRHIFMASPENVILSPP-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6412 for 143 contacts (-44.8/contact) +
2D Compatibility (PS) -3864 + (NN) -2730 + (LL) 9412
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -5394.0 ( -37.72 by residue)
QMean score : 0.511
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