Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDGPLSSPFGLRRFFNGEERNPHSGLDFAVPAGTPIKAPAAGKVILIG--DYFFNGKTVFVDHGQGFISMFCHLSKIDVKLGQQVPRGGVLGKVGATGRATGPHMHW----NVSLNDARVDPAIFIGAFQP |
| 4QPB Chain:A ((33-136)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HYGVDFFMNIGTPVKAISSGKIVEAGWSNYGGGNQIGLIENDGVHRQWYMHLSKYNVKVGDYVKAGQIIGWSGSTGYSTAPHLHFQRMVNSFSNSTAQDPMPFL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50340 for 680 contacts (-74.0/contact) +
2D Compatibility (PS) -10405 + (NN) -2553 + (LL) 10320
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -59128.0 ( -86.95 by residue)
QMean score : 0.539
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