Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDR-FADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
1WJZ Chain:A ((28-90))
-----------------ANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1805 for 309 contacts (-5.8/contact) +
2D Compatibility (PS) -7320 + (NN) -8366 + (LL) 10628
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -10063.0 ( -32.57 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1WJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WJZ-query.scw
PDB file :
Tito_Scwrl_1WJZ.pdb
: