Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGLWTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTTWNKGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATVVGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGRLEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA
1T3D Chain:A ((100-260))
-------DIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIV------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125106 for 1323 contacts (-94.6/contact) +
2D Compatibility (PS) -17245 + (NN) -7408 + (LL) 6436
1D Compatibility (HY) -12400 + (ID) 3700
Total energy: -159423.0 ( -120.50 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1T3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T3D-query.scw
PDB file :
Tito_Scwrl_1T3D.pdb
: