Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEPLILDAPNADACIIWLHGLGADRTDFKP-VAEALQ--MVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--ALDERHKRIP-VLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL
3U0V Chain:A ((21-229))
------------SASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNH-QDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKL
General information:
TITO was launched using:
RESULT:
Template:
3U0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160431 for 1667 contacts (-96.2/contact) +
2D Compatibility (PS) -21796 + (NN) -7008 + (LL) 836
1D Compatibility (HY) -16400 + (ID) 2750
Total energy: -207549.0 ( -124.50 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3U0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U0V-query.scw
PDB file :
Tito_Scwrl_3U0V.pdb
: