Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHA---------------MFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK |
1KC3 Chain:A ((50-180)) | ---VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -851 for 654 contacts (-1.3/contact) +
2D Compatibility (PS) -11453 + (NN) 4794 + (LL) 2024
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -10636.0 ( -16.26 by residue)
QMean score : 0.019
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