Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVMDTGLRRNRFARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADG---FVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGP-IGVLAASPL-----AIHHALM-LPDWGATTFFLNGVFEPDAEQMSRLDRRGVTIEREAVVALGGARAD-----------------VTLASGRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAALAAGNVAIAVGDGARTGGAAHHSLLFR |
| 4NTC Chain:A ((12-315)) | --------------ALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATGVRDIPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVLALGPIANPARALHLARMALRLSESVTIYTNG-----NEQLAKEIQQAA---EESPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEG--GDILTTPPFYETSVPGVFAVGDCATPLKAVTPAVSMGSLAAG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163013 for 2248 contacts (-72.5/contact) +
2D Compatibility (PS) -29707 + (NN) -9451 + (LL) 2060
1D Compatibility (HY) -15200 + (ID) 4700
Total energy: -220011.0 ( -97.87 by residue)
QMean score : 0.367
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