Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQDKLKVAVLFGGSSEERDVSIASGAQVIQALRSAGHQVLAVDTASGLLGAEEERRLLASKVKEVPPDSDSLAIIRSGKQSLLSAGELAGVDVFFLALHGGTGEDGTLQALLDAGGFAYTGSGHLASAMAMDKDVAKRLFLAAGVETASWLMAPASEE---EVREQLGFPLVVKPNSQGSTVGLSIVHSQAELQPAIELAGRYGDEVMLERFVAGREVTVGVLDDQALPVGEILLGGQEVFDYEHKY-QAGAVREVFPADLPPAIAAEAQRLALKVHRALKLSGYSRTDFRLDEQGRLWCLEVNTLPGMTATSLLPQAAAAAGIGFAELCERICRLGIERCKGARKARS |
| 3R23 Chain:A ((5-294)) | ------RIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITL--------NEKMDLIEKAKD--------------------------IDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEWDSEVVIEKYIKGEEITCSIFDGKQLPIISIRHAA-EFFDYNAKYDDASTIEEVI--ELPAELKERVNKASLACYKALKCSVYARVDMMV-KDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156566 for 2256 contacts (-69.4/contact) +
2D Compatibility (PS) -31876 + (NN) -12586 + (LL) 2816
1D Compatibility (HY) -28800 + (ID) 5650
Total energy: -232662.0 ( -103.13 by residue)
QMean score : 0.450
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