Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGL--PNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALAREL-PAAELLRTLVEELRG |
3BO9 Chain:A ((18-314)) | ---RVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSP----------WAD----------------------------DLVKVCIEEKVPVVTFGAGNPTK-YIRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIG---------EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKIVKASIRDTVVTGAKLGHPARVLRTPFARKIQEMEFENPMQAEEMLVGSLRRAVVEGDLERGSFM-----VGQSAGLIDEIKPVKQIIEDILKEFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184908 for 2757 contacts (-67.1/contact) +
2D Compatibility (PS) -31766 + (NN) -12262 + (LL) 3256
1D Compatibility (HY) -18400 + (ID) 5700
Total energy: -249780.0 ( -90.60 by residue)
QMean score : 0.489
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