Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD
2K4Y Chain:A ((7-69))
LNEVEIKSKVKVIGIVP--ESKVRRKIMDMGIVRGTEIYIEGKAPMGDPIALRLRGYSLSLRKSE----------
General information:
TITO was launched using:
RESULT:
Template:
2K4Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23748 for 359 contacts (-66.2/contact) +
2D Compatibility (PS) -6722 + (NN) -3024 + (LL) 1400
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -39344.0 ( -109.59 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_2K4Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K4Y-query.scw
PDB file :
Tito_Scwrl_2K4Y.pdb
: