Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK |
| 1V63 Chain:A ((39-76)) | --------------------------------------------------------------------------VEIGSR-WQRISQSQKEHYKKLAEEQQRQ-YKVHLDLWVK----------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1V63.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4758 for 154 contacts (30.9/contact) +
2D Compatibility (PS) -4133 + (NN) -2167 + (LL) 12452
1D Compatibility (HY) 400 + (ID) 250
Total energy: 11060.0 ( 71.82 by residue)
QMean score : 0.438
|
|
|