Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNGDIEVVTSVGKPAYYEQKPAPDKDVTKAYGLTIQYFVTQN----RVVLIDQ-AKVIQE-----GNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRPRIDMVIQPKKKAQ
2R19 Chain:A ((34-127))
-----------------------------------------------------------QPIHIESDQQSLDMQG----NVVTFTGN-VIVTQGT------IKINADKVVVTRPG-QGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNA----------------------
General information:
TITO was launched using:
RESULT:
Template:
2R19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18968 for 564 contacts (-33.6/contact) +
2D Compatibility (PS) -9128 + (NN) -3364 + (LL) 5380
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -29030.0 ( -51.47 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2R19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R19-query.scw
PDB file :
Tito_Scwrl_2R19.pdb
: