Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQYVYTMHRVGKIVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAG-VDTEIEGEARPMPGINVGYLPQE--------------PKLDPQATVRDIVEEAV-GQIKQAQARLDEVYAAYAEPDADFDALAAEQAKLEAILQASDGHN-LERQLEVAADALRLPPWDAKVEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDAD---SVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGHGIPFEGNYSGWLESKAARLAQEAKQEASHAKAMKAELEWVRQGAKGRQAKSKARLQRFEELQSQEFQKRSETNEIYIPAGPRLGDKVIELHNVTKGYGD-RVLIDNLSLSIPKGAIVGVIGGNGAGKSTLFRMLTGKEQPDSGTIEIGETVQIASVDQSRDSLEGNKTVWEQVSD-GFEQIKIGNYEVPSRSYVGRFNFKGADQQKFVKDLSGGERGRLHLALTLKQGGNVLLLDEPSNDLDVETLRALEEALLDF----PGAAIVISHDRWFLDRIATHILSYEDDGKVTFFEGNYTEFEADRKKRLGDAASQPHRVRYKKLA |
| 1YQT Chain:A ((47-476)) | -------------------------------GMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQYV--DLIPKAVKGKVIELLKKADET------------------GKLEEVVKALELENVLERE----------------IQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVV---YGEP--GVYGIFSQPKGTR-------------------NGINEFLRGYLKDENVRFRPYE-IKFTKTGERVEIERETLVTYPRL----------VKDYGSFRLEVE--PGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLTVAYKP-QYIKADYEG--TVYELLSKIDASKLNSNFYKTELLKPLGIIDL----YDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLMVFE--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103735 for 3203 contacts (-32.4/contact) +
2D Compatibility (PS) -43636 + (NN) -24374 + (LL) 10956
1D Compatibility (HY) -26800 + (ID) 6500
Total energy: -194089.0 ( -60.60 by residue)
QMean score : 0.366
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