Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTASEEKFTRQTLLDVQPLTPNLFTLRTSRDAGFRFRAGQFARLGVYKPSGSIVWRAYSMVSAPHDEFLDFFSIVVPDGEFTSELSRLREGDQLLVDRQAFGFLTLDRFVDGRDLWLLATGTGVAPFVSILQDFEVWERFESIKLVYSVRESKELAYRELIA-GLAEREYLAEHA-HKLQFIPVVTREQVPGCLNGRITTLIENGDLERAADL-ELTPEHSRVMLCGNPQMIEDTRAVLKARGMNLSLTRRPGQVAVENYW
4B4D Chain:A ((8-244))-------FGAETVLEVRHWTDAYFSFTTTRDAGFRFENGQFVMIGLETETRPLL-RAYSIASANWEEHLEFFSIKVPDGPLTSRLQHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGLAPWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFERELPQHEFLGDLLREKLLYYPAVTRETFAN--QGRLTELMADGRMQQTLGLPTLDPANDRFMICGSPQMLADLRSLLDSRGFQTS--------------


General information:
TITO was launched using:
RESULT:

Template: 4B4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180686 for 1894 contacts (-95.4/contact) +
2D Compatibility (PS) -25106 + (NN) -4679 + (LL) 2072
1D Compatibility (HY) -23600 + (ID) 4950
Total energy: -236949.0 ( -125.11 by residue)
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_4B4D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B4D-query.scw
PDB file : Tito_Scwrl_4B4D.pdb: