Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAISFRPMTEADLDAVLKIEYAAFSHPWTRGIFSEGLKNYHC--WLMFEGSQQVGHGVIQI------------ILDEAHLLNITVKPESQGRGLGLRLLEHLMREAAG-HQARECFLEVRASNQAAYRLYERYGFNEIGRRRDYYPAVGGREDALVMACTLFD
2X7B Chain:A ((22-167))
-------------DIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKGYY---ADGEDAYLMARP---
General information:
TITO was launched using:
RESULT:
Template:
2X7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83450 for 920 contacts (-90.7/contact) +
2D Compatibility (PS) -14450 + (NN) -5305 + (LL) 1452
1D Compatibility (HY) -14400 + (ID) 2050
Total energy: -118203.0 ( -128.48 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2X7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X7B-query.scw
PDB file :
Tito_Scwrl_2X7B.pdb
: