Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQ-RQAFAVVKANAYGHGAREVV-TALHDDADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGA---EQGEAFLAAGLDIPLNVWLKLDSGMHRLGF-DPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLLDLDFDQRSL---ANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAA-ELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDL-SDLPEARVGDPVELWGAG----LSVDEVARACGTLGYELLSKVTARVPRRYSH |
| 1BD0 Chain:A ((10-368)) | -----AEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVL-GASRPADAALAAQQRIALTVFRSDWLEEASALYSGPF--PIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRL-QHFHVLVDGQKAPIVGRICMDQCMIRLPGPLP---VGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216632 for 2836 contacts (-76.4/contact) +
2D Compatibility (PS) -36645 + (NN) -9381 + (LL) 992
1D Compatibility (HY) -30400 + (ID) 6800
Total energy: -298866.0 ( -105.38 by residue)
QMean score : 0.424
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