Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLRG-QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALREG--DCAMVTYN-LNERAERPVIEYAAAHAKGILVKKALASGHACLGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA |
| 1PZ0 Chain:A ((6-209)) | ------------LGKSDLQVFPIGLGTNAVGGHN--LYPN----LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPD---EHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSG--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71556 for 1566 contacts (-45.7/contact) +
2D Compatibility (PS) -21707 + (NN) -8146 + (LL) 5000
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -111109.0 ( -70.95 by residue)
QMean score : 0.529
|
|
|