Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSADKPEQPEHDQEMPLVSHLTELRTRLLRSVAAIFLIFAGLFYFSQKIYTLVSEPLRRFLPEGTSMIATDVASPFLAPFKLTMVVALFLAMPVILAQVWGFIAPGLYKHEKRVALPLLVSSIILFYAGMAFAYFLVFPMIFHFFASVTPEGVAMMTDINSYLDFVLTLFFAFGVAFEIPVATVLLIWIGVVDVDYLKKIRPYVIIGCFVVGMVLTPPDIFSQTMLAVPMWLLFEIGLLFGRLV---RKRGEHPDDQPASDGDQPPATRQ
4UG2 Chain:A ((33-135))--------------------------------------------------------------------------------------------------------------------------------------------------------------LNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFV--LVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKG-------------------


General information:
TITO was launched using:
RESULT:

Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74026 for 507 contacts (-146.0/contact) +
2D Compatibility (PS) -8630 + (NN) 4190 + (LL) 14508
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -74008.0 ( -145.97 by residue)
QMean score : 0.075

(partial model without unconserved sides chains):
PDB file : Tito_4UG2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UG2-query.scw
PDB file : Tito_Scwrl_4UG2.pdb: