Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTR--SHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 2Q8M Chain:A ((3-322)) | ----TLGEFIVEKQHEFSHAT-GELTALLSAIKLGAKIIHRDINKAG----------------------LFANEKLKAALKARDIVAGIASEEEDEIVVFEG-CEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYR---RVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYI-KFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPD--GKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182405 for 2558 contacts (-71.3/contact) +
2D Compatibility (PS) -31733 + (NN) -15920 + (LL) 1456
1D Compatibility (HY) -29200 + (ID) 6550
Total energy: -264352.0 ( -103.34 by residue)
QMean score : 0.503
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