Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRLLNLTLQRGPQRLLEAAELTLHAGQKAGLIGANGAGKSSLFALLRGQL------GQDAGDCLLPADWRIAHMRQEVDTLDRLAVDYVLDGDSRLREIQAALAVAEAAHDGSALARLHTELDNADGYTADARARKLLAGLGFSSEQMERRVGDFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLD-------AILWLEEWLKGYPGTLVLISHDRDFLDAVVD--HVVHLENRKLTLYRGGYSAFERTRAERLAQQQQAYEKQQAQRAHMESFIARFKAKATKARQAQSRIKALERLEELAPAHVDSPFNFSFRESDKISRPLLDLGEGRLGYGDKAVLEKVKLQLVPGARIGLLGPNGAGKSTLIKTLAGDLPELGGRLLRGENLAIGYFAQHQLDSLDPQASPLLH---LQRIAPGEREQTLKDFLGGFDFRGVRVDEPVLNFSGGEKARLALALIAWQKPNLLLLDEPTNHLDLEMRLALTMALQEF----SGAVLVVSHDRHLLKSTTDEFLLVADGRVVPFDGDLDDYARWLVDYRARKAPQAETAPGAPTERTD-----KRAQRQAAAALRQQLAPHKREADKLERELGGLHEKLAAIEARLGDSALYDVSRKDELRELLSEQSSLKVREGELEERWLEALETLEALQKELEASE |
| 1YQT Chain:A ((43-528)) | ----------------------VVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRA-FRGNELQNYFEKLK--------NGEIRPVVKPQYVDLIPKAVKGKVIELLK----KAD---ETGKLEEVVKALELEN-VLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGK----SVLVVEHDLAVLDYLSDIIHVVYGEP-------GVYGIFSQPKGTRNGINE-------FLRGYLKDENVRFRPYEIKFTKTGERVE-IER-ETL----VTYP------------RLVKDYGSFRL--------EVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKI--EWDLTVAYKPQYIKADYEGTVYELLSKIDASKLNSNFYKTELLKPLGIIDLYDREVNE----LSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSD--------RLMVFEGEPGKYGRALPPMGMREGMNRFLASIGITFRRDPDTGRPRANKEGSVKDREQ---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121589 for 3732 contacts (-32.6/contact) +
2D Compatibility (PS) -48739 + (NN) -11869 + (LL) 14372
1D Compatibility (HY) -25600 + (ID) 7000
Total energy: -200425.0 ( -53.70 by residue)
QMean score : 0.291
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