Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPV--VITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG |
3A3I Chain:A ((249-284)) | -------------------------------------------FNGKVLLPQKPQQGQLLAKHLSKPLPDLLKKMMKKS----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -591 for 91 contacts (-6.5/contact) +
2D Compatibility (PS) -3559 + (NN) -2398 + (LL) 8368
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -2780.0 ( -30.55 by residue)
QMean score : 0.241
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