Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMNDEPQSSSLDNFWMPFTANRQFKARPRLLESAEGIHYIAQGGRRILDGTAGLWCCNAGHGRREISEAVARQIATLD-YAPPFQMGHPLPFELAARLTEIAPPSLNKVFFTNSGSESADTALKIALAYQRAIGQGTRTRLIGRELGYHGVGFGGLSVGGMVNNRKAFSANL-LPGVDHLPHTLDVARNAFTVGLPEHGVEKAEELERLVTLHGAENIAAVIVEPMSGSAGVVLPPKGYLQRLREITRKHGILLIFDEVITGFGRVGEAFAAQRWGVVPDLLTCAKGLTNGSIPMGAVFVDEKIHAAFMQGPQGAIEFFHGYTYSGHPVACAAALATLDIYRRDDLFQRAVE-----LEGYWQDALFSLRDLPNVVDIRAVGLVGGV---------QLAPHADGPGKRGYDVFERCFWEHDLMVRVTGDIIAMSPPLIIDKPHIDQI-------VERLAQAIRASV |
| 4A6R Chain:A ((34-455)) | -----------------------------RVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMH-----DLPIPGMAHIEQPW-WYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGG----DFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRE---TFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFR----NNLIMRACGDHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQTLKA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262022 for 3521 contacts (-74.4/contact) +
2D Compatibility (PS) -43674 + (NN) -18761 + (LL) 3196
1D Compatibility (HY) -31600 + (ID) 7700
Total energy: -360561.0 ( -102.40 by residue)
QMean score : 0.528
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