Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSFVLLAFTLSLLAGCSSGPRLNTDYTSANQDS----RVQFIVLHYTSTDLPHSLGILTHGGVSAHYLI-GDDEPAT---------VYRLVDENRRAWHAGVSEWQGRTWLNATSIGIEIVNQGYRDTPQGRVWYP-FSEAQIQALIPLLKDIAKRH-GITPDRIIGHSDIAPGRKVDPGPLFPWKRLADAGLVPWPKPG--ELARRLAELNGQLPDVRWFQQQLARHGYLVPQTGELEKDTRDVIGAFQMKYRPARFDGEPDLETAALLLAVPTS
4BXE Chain:A ((2-249))
----------------------LTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDD--DGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDG-LPPRADLLEAFRLYGYALPATVD-DAYFASLLRAFQMHFRPENYDGALDVETAAILYAL---
General information:
TITO was launched using:
RESULT:
Template:
4BXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102172 for 1747 contacts (-58.5/contact) +
2D Compatibility (PS) -25832 + (NN) -19569 + (LL) 1636
1D Compatibility (HY) -16800 + (ID) 5250
Total energy: -167987.0 ( -96.16 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4BXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BXE-query.scw
PDB file :
Tito_Scwrl_4BXE.pdb
: