Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDFSKWTGQVALISGAGSELGIGFAIARRLAREGVRLLITASSERIRQRAEELSACGHDVRAASADLTDEAQVQGLLDWAEAQWGRVDILVNNAGMAQLDSAEPFSAVEATSLRDWQLSLSRNLTSAFLLTRGLLPGMRERGYGRIVNVASTTGTRGSNPGEAAYSAAKAGLVGWSMGLALEVAKSGITVNSVAPGWIATASSTA---EERQAALAS-PSGRAGRPEEVAAAVAFLASPEASFVNGELLVVDGGNCLIENKRS
3TZH Chain:A ((5-251))
-SQFMNLEGKVALVTGASR--GIGKAIAELLAERGAKVIGTATSESGAQAISDY--LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE------WSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI-----
General information:
TITO was launched using:
RESULT:
Template:
3TZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114564 for 2078 contacts (-55.1/contact) +
2D Compatibility (PS) -27324 + (NN) -17686 + (LL) 1104
1D Compatibility (HY) -16000 + (ID) 5400
Total energy: -179870.0 ( -86.56 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3TZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZH-query.scw
PDB file :
Tito_Scwrl_3TZH.pdb
: