Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKITINSQECEVKPGLTIIQACETVGVEIPRFCYHERLAIAGNCRMCLVEVKGGPPKPVASCAMPVAEGMVIYTDTPKVKKAREGVLEFLLINHPLDCPICDQGGECDLQDITVVYGKGNSRFDEHKRAIPKKHFGQLIEAAMNRCIHCTRCIRFLSDVAGTNELGGIGRGENMEISTYIKKHISSELSGNIIDLCPVGALTSKPYSFT-----ARPWELSHCETIDVLDAVGSSIRVDYRGPEVMRILPRLNEEVNEEWISDKTRFAYDGLKVQRLDQPYIKRDNRLVPADWNEALTVAAKKLRSTKPNKIAAIAGDLADCESMLLLKEIMQKLGSSNIDCRQDGAKLIPNNRGSYVFNTTIEGIENVDLCLLINTNPKVEAPIINARIRKRYL-QGNFPIASIGPDIEYLYHVEKLGNN-PGVLNEIAKGNHKFCKLLSAAQNPMLIIGQDALTRDDSESILALAGAIAEKFNMVRNDWNGFNVLHKAAARVGGLDIGFV----PKKDGKNINQILEQAESGEIEVVYLLGADEINTLKLENAFVIYQGHHGDRGAHMADIILPGAAYTEKYATYVNTEGRVQRAKLAVSPPGEAKEDWSIIKNLSQYLGLSLPYDSLFDVRKKLDAIGPQFRNTDQVVK-------------------NKWMSITCNEIKLSSV-------------------PFFLKECNFYMTDSISRASKIMANCTKAFYEHAS-------------------------------------------------------------------------------------------------------------------------------------- |
| 1G8K Chain:A ((4-825)) | NDRITLPPANAQRTNMTCHFCI---VGCGYHVYKWPELEEGGRAPEQNALGLDFRKQLPPLAVTLTPAMTNVVTEHDGARYDIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKERLSAPRLYAADEWVDTTWDHAMALYAGLIKKTLDKDGPQGVFFSCFDHGGAGGG--FENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGELNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDP----RETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQ---GWIDKPFIEAHTKGFDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIATHNVGRRGTGCVRMGGHQEGYTRPPYPGDKKIY----IDQELIKGKGRIMTWWGCNNFQTS------NNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGL-------------------FVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQFE--GFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRKSGNNGVQLPVVSWDESKGLVGTEMLYTEGKFDTDDGKAHFKPAPWNGLPATVQQQKDKYRFWLNNGRNNEVWQTAYHDQYNSLMQERYPMAYIEMNPDDCKQLDVTGGDIVEVYNDFGSTFAMVYPVAEIKRGQTFMLFGYVNGIQGDVTTDWTDRDIIPYYKGTWGDIRKVGSMSEFKRTVSFKSRRFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52820 for 5731 contacts (-9.2/contact) +
2D Compatibility (PS) -66475 + (NN) -9156 + (LL) 3936
1D Compatibility (HY) 9600 + (ID) 3850
Total energy: -118765.0 ( -20.72 by residue)
QMean score : 0.210
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