Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKLAVFDFDSTLVNAETIESLARAWGVFDEVREITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEVCESLPLFEGAFELISALKEKNYKVVCFSGGFDLATNHYRDLLNLDAAFSNTLIVENNALNGLVTGHMMFSYSKGEMLLALQRLLNISKDRTLVVGDGANDLSMFKHAHIKIAFNAKEILKQHATHCIDKPNL-ALIKPLI
3N28 Chain:A ((106-312))
KPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQTAVRFAGLGGVVCILS
General information:
TITO was launched using:
RESULT:
Template:
3N28.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135985 for 1720 contacts (-79.1/contact) +
2D Compatibility (PS) -23020 + (NN) -15546 + (LL) 0
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -192851.0 ( -112.12 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_3N28.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N28-query.scw
PDB file :
Tito_Scwrl_3N28.pdb
: