Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSEFGDKNEKLLHKVENLNPDVIAITGDLFDRQGD--------SVPKELIKKLTKIAPVYFSPGNHEYD--VKNAYEDDYKPFLEKMGVVNLEDKT-----ATIDVGGQKFQ-MSGLRSSANLDYDYSYYKKGLAEIQTQQDSQYYQVLLSHMP-----------------DYFKLYVENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFP--------RLGNPYEIVAVTIKPELK--------------------------------- |
| 4KBP Chain:A ((121-432)) | ------------------------------------QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPK-KGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVK--RSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVH------AYERSERVSNIAYKI-TDGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48934 for 1813 contacts (-27.0/contact) +
2D Compatibility (PS) -25370 + (NN) -9562 + (LL) 5204
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -88412.0 ( -48.77 by residue)
QMean score : 0.359
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