Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHHWGYGK--H----NGPEHWHKDFPIANGERQSPVDIDTKAVVQDPALKPLALVY-GEATSRRMVNNGHSFNVEYDDSQDKAVLKDGPLTGTYRLVQFHFHWGSSDDQGSEHTVDRKKYAAELHLVHWNT-KYGDFGTAAQQPDGLAVVGVFLKVGD-ANPALQKVLDALDSIKTKGKSTDFPNFDPGSLLPNV---LDYWTYPGSLTTPPLLESVTWIVLKEPISVSSQQMLKFRTLNFNAEGEPELLMLANWRPAQPLKNRQVRGFPK |
3FW3 Chain:A ((5-266)) | ----WCYEVQAESSNCLVPVKWG---GNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEK----------PEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQT-VSMKDNVRPLQQLGQRTVIKS-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78963 for 1917 contacts (-41.2/contact) +
2D Compatibility (PS) -25590 + (NN) -14770 + (LL) 852
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -137021.0 ( -71.48 by residue)
QMean score : 0.427
|
|
|