Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
3O5Q Chain:A ((20-126))
-GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK
General information:
TITO was launched using:
RESULT:
Template:
3O5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55392 for 784 contacts (-70.7/contact) +
2D Compatibility (PS) -11658 + (NN) -3953 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -81395.0 ( -103.82 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3O5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O5Q-query.scw
PDB file :
Tito_Scwrl_3O5Q.pdb
: