Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MCWTMPSPFTGSSTRNMESGNQSTVTEFIFTGFPQLQDGSLLYFFPLLFIYTFIIIDNLLIFSAVRLDTHLHNPMYNFISIFSFLEIWYTTATIPKMLSNLISEKKAISMTGCILQMYFFHSLENSEGILLTTMAIDRYVAICNPLRYQMIMTPRLCAQLSAGSCLFGFLILLPEIVMISTLPFCGPNQIHQIFCDLVPVLSLACTDTSMILIEDVIHAVTIIITFLIIALSYVRIVTVILRIPSSEGRQKAFSTCAGHLMVFPIFFGSVSLMYLR-FSDTYPPVLDTAIALMFTVLAPFF----NPIIY-----SLRNKDMNN--AIKKLF----CLQKVLNKPGG- |
| 4UX8 Chain:C ((25-343)) | DRLDCVKASDQCLK--EQSCSTKYRTLRQCVAGKETNFSLTSGLEAKDECRSAMEALK-----------------------QKSLYN-----------------CRCKRGMKKEKNCLRIYWSMYQSKGNNCLDAAKACNLDDTCKKYRSAYITPCTTSM--SNEVCNRRKCHKALRQFFDKVPAKHSYGML-FCS--------CR-----DIACTERRRQTI--------------VPVCSYEERER--PNCLSLQDSCKTNYICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYVDSSSLSVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFGNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173656 for 1779 contacts (-97.6/contact) +
2D Compatibility (PS) -25249 + (NN) 7815 + (LL) 8284
1D Compatibility (HY) -2400 + (ID) 2450
Total energy: -187656.0 ( -105.48 by residue)
QMean score : 0.051
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