Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIISDKVRQILSYYESENPGVRANLTRILMHGKLGGTGKLVILPVDQGFEHGPIKSFEVNPHAYDPHYHFQLAIDSGVSAYAAPLGMIEAGASTYAGMLPHILKLNSSNSLHSKSLTSDQAVTASVKDALRLGCTAVGFTIYPGSAKCFDMIEEARKIIAEAKSYGLAVVLWSYPRGEGISKEGETAVDVIAYAAHIAALLGANIIKVKLPTNHLEKEKIEAGNIKSLSKRIEYVKKSCFAGKRIVVFSGGESKSVNDIYNEAKEIKQGGGNGSIIGRNTFQRKKEEALSMLKDIMDIYT |
| 1OJX Chain:A ((3-252)) | -------------------NLTEKFLRIFAR-----RGKSIILAYDHGIEHGPADFMD-NPDSADPEYILRLARDAGFDGVVFQRGIAEKYYD---GSVPLILKLNGKTTLYNGE--PVSVANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNE--TAPEIVAYAARIALELGADAMKIKYT-----------GDPKTFSWAVKVAGK-----VPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR--RDALKFARALAELVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125281 for 2213 contacts (-56.6/contact) +
2D Compatibility (PS) -27775 + (NN) -14731 + (LL) 3088
1D Compatibility (HY) -16800 + (ID) 4400
Total energy: -185899.0 ( -84.00 by residue)
QMean score : 0.531
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