Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIIGN---ASKELGKLIANKLNVQPFSAQVSKFADGAINAEVESNLCSQEVYIIQSISPPVNDHLMELLFIIDAVKRSGTKRITTIIPYYGYSRQDRIIKNNNMQSALNAKLVANLIQTAGASSVAVIDLHSSQIEGFFDVPLTNLSCFEAFADSIHI-----ENLAIVAPDVGAIGRARAFAKTLEKKYEIKLSDKIIIIDKYREKAGTSHVMNVIGEATNKNCVIVDDIVDSGGTLCNAALALKNRRARSVISCITHGVLSGNAIEKISSSSLDKLVTTDTIFHKL--EKTDKIEIVSIANILTHFIQGGKDAS |
2JI4 Chain:A ((30-365)) | LVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQ-----------SIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLR--------LGIAVIH----------PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260292 for 2338 contacts (-111.3/contact) +
2D Compatibility (PS) -31160 + (NN) -17314 + (LL) 1760
1D Compatibility (HY) -23600 + (ID) 4700
Total energy: -335306.0 ( -143.42 by residue)
QMean score : 0.570
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