Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------MMLDKENPIIKEFEEAGAILHGHFVLSSGLHSDTYTQCAKIFENPSRAMKVCELLANKIKKELNSSIDLILSPAIGGIIVGYEIGRQLRMKTMFCERVNGKFELRRGF--------------EIKRGEKILLVEDVITTGKSSLEAVKCAEDMGGKVVAEASLIKR-NSETKLPFSIISLLELSIKNYSEAELPEELKKLPIIKPGSREYLSNCSK |
1O57 Chain:A ((2-276)) | KFRRSGRLVDLTNYLLTHPHELIPLTFFSERYESAKSSISEDLTIIKQTFEQQGIGTLLTVPGAAGGVKYIPKMKQAEAEEFVQTLGQSLANPERILPGGYVYL----TDILGKPSVLSKVGKLFASVFA---EREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLS-------TINMKEKSIEIQNGNFLRFFKDN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86971 for 1481 contacts (-58.7/contact) +
2D Compatibility (PS) -19401 + (NN) 1466 + (LL) 1200
1D Compatibility (HY) -10800 + (ID) 1650
Total energy: -116156.0 ( -78.43 by residue)
QMean score : 0.405
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