Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSDD---KVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTI-VEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQLAARSYAEKYGAVY-MNQFESEHNPDTYFHTLGPEL---TSALQQIDYFVAGIGSGGTFTGTARYLK--QHHVQCYAVEPEGS-VLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNL--KAQLSEGTIVVVFPDGSDRYMSKQIFNYEENDYE |
| 4LMB Chain:A ((17-317)) | -----LVGRTPLVQLNRIPVAEGVKARIVVKLESMNPAASVKDRIGVSMVEDAEAAGLIHPDKTILVEPTSGNTGIALAMVAAAKGYRLVLTMPETMSLERRAMLKAYGAQLELTPGSQGMEGAITRAEEIVENTPNAYSLQQFRNPANPKIHRETTAEEIWADTDGL--VDIVIGGVGTGGTITGIAETIKPRRPQFQAIAVEPSNSPVLSGGQPGPHKIQGIGAGFIPAIFRPELIDEVIIVDDTEAFAYARRLARQEGLLSGISAGAALWAAIQVGKRPENEDKLIVMIQPSFGERYLSTALFKD------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83749 for 2689 contacts (-31.1/contact) +
2D Compatibility (PS) -31051 + (NN) -3700 + (LL) 968
1D Compatibility (HY) -19200 + (ID) 5500
Total energy: -142232.0 ( -52.89 by residue)
QMean score : 0.388
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